Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887507.1_cds_XP_016441928.1_37243
CDS Infomation

[gene=LOC107767433] [db_xref=GeneID:107767433] [protein=protein trichome birefringence-like] [protein_id=XP_016441928.1] [location=complement(join(1738..2092,2704..2862,2955..3148,3230..3422,3794..4839))] [gbkey=CDS]
Sequence

ATGGATACAGCAAAATATACACCAATTAATGGTGGAAAAACTCTCATTACAGACCTGAAA
GCTCACTTCTCTTTTCTGAAAACCAAAAGAACTGTTACTTGTGCATATGGGTTCATGTTT
GTATTCGTTGCTGTTACATTTTTCTTGGCTTTTAGTCCTTCTCCTAACTCTTCTTCTCCT
TGGTTCACAAACATTTTCTCTTTAAGCAGTAGCACTAGTACTAGTGGAACTATTTCTACA
CCAGCAACAACATCAGCTCCAGTTTTCTCTGATCAATCTTATGGATCTCACTTTTCTTCA
GTTTACTCTTACTTTTTTCCCAACTCTTCACAGCAAGTTCAAAACTTTACTACGCCCAGA
TCCCAAAACTCAACATTTGAGCCTCCCAATTTGAATAAAGATTTGGGTATTGGTAAAAAT
GAGACTCTTAGGAATGAGTCACATGATAAAGTTGAAGTCTTGAAAAACCCCTTGAAGCCT
TCTGTGAATGTGACAGCTCAAAAATCTTCTTCTGGATCGAATCAAGAATCATCAAGTGCA
AAGAATCAGCCCCAAAGTAAAGATTTTGATGATAACGTTGGAGCATTGAAGGCAAATCAG
AGCTCAAATTCAGCACCAAAATCTTCTTCTGGAACTAATAAAGAATCATCAAGCGCAAAG
AATCAGACCCAAAGTAAAGATTTTGACGATAATGTTGGAGTCTTGAAGGCAAATCAGACC
ACAAATTCAGCACCAAAATCTGCTAATGGGAGCAAAGAGAAAGAAATTGAGGGAGTGAAG
AGTAATTTCACATCCTCGTTTGTTAAAAAACAGAGTAATGAGACTAACTTGGATGTGTCG
GCAAAGAATAAGGATGGAGATTTGGTTAAGTCTTTGTTGGATTGTGATTTCTTTGATGGG
AATTGGGTGAAAGATGAGTCTTACCCTTTGTATAAACCTGGTTCTTGTTCTTTAATTGAT
GAGCAATTCAACTGTTTTCTCAATGGTAGACCTGATAGTAATTACATCAAAATGAAATGG
AAGCCCAATGCCTGCACTCTTCCAAGATTGAATGGCACTCATATGCTGGAATTATTGAGA
GGAAAAAGATTAGTATTTGTTGGTGATTCTCTCAATAGGAACATGTGGGAATCCCTTGTT
TGCATACTTAGAAACTCTGTAAAAGATCAGAAGAAGGTTTATGAAGAATTTGGGAGACAC
CATTTTAGGACAGAAGCTTCCTATTCATTTCTATTCGAAGAGTACGATTGCAGAGTGGAG
TTCTTTGTATCTCCTTTCTTGGTTCAAGAATGGGAATTTGCAGATAAAAAAGGAGTAAAG
AAGGAAACTCTCAGACTTGATTTAATTGGACAGTCTGCTGATAAATATAAAAATGCAGAT
ATCTTAATCTTCAACACCGGCCACTGGTGGACTCACGAGAAGACTTCCTTGGGGAAGGAC
TATTATCAAGAAGGAAGTCACGTGTACAGCGAGTTAGATGTCCTTGAAGCATTTCGAAAA
GCTTTAACAACATGGGGAAGATGGGTTGATTCCCATGTAAATTCCCAGAAGACATTTGTT
CTCTTTAGAGGTTATTCTGCATCTCATTTTAGTGGTGGACAGTGGAATTCTGGTGGAGCT
TGTGACCACGAAACAGAACCAATCAAGAACAACACATATCTTACTCCTTATCCATCTAAG
ATGAATGTATTGGAGAGAGTTTTGAGAGGAATGAAAACTCAAGTCTCCTATCTCAATGTC
ACAAGAATGACAGATTATAGGAAAGATGGGCACCCATCAATTTATAGGAAACAAAAATTG
ACCAATGAGGAGAAGAAATCTGAATTGCTATTCCAAGATTGCAGCCATTGGTGCCTCCCT
GGTGTACCTGATGCTTGGAATGAGCTTCTATATGCCAAAATTTTAGTAAATCAACACATG
AAACAACAAGAGGACAAAAAGACATAG

Peptide Sequence

PEP ID

XP_016441928.1
PEP Infomation

PREDICTED: protein trichome birefringence-like [Nicotiana tabacum]
Sequence

MDTAKYTPINGGKTLITDLKAHFSFLKTKRTVTCAYGFMFVFVAVTFFLAFSPSPNSSSP
WFTNIFSLSSSTSTSGTISTPATTSAPVFSDQSYGSHFSSVYSYFFPNSSQQVQNFTTPR
SQNSTFEPPNLNKDLGIGKNETLRNESHDKVEVLKNPLKPSVNVTAQKSSSGSNQESSSA
KNQPQSKDFDDNVGALKANQSSNSAPKSSSGTNKESSSAKNQTQSKDFDDNVGVLKANQT
TNSAPKSANGSKEKEIEGVKSNFTSSFVKKQSNETNLDVSAKNKDGDLVKSLLDCDFFDG
NWVKDESYPLYKPGSCSLIDEQFNCFLNGRPDSNYIKMKWKPNACTLPRLNGTHMLELLR
GKRLVFVGDSLNRNMWESLVCILRNSVKDQKKVYEEFGRHHFRTEASYSFLFEEYDCRVE
FFVSPFLVQEWEFADKKGVKKETLRLDLIGQSADKYKNADILIFNTGHWWTHEKTSLGKD
YYQEGSHVYSELDVLEAFRKALTTWGRWVDSHVNSQKTFVLFRGYSASHFSGGQWNSGGA
CDHETEPIKNNTYLTPYPSKMNVLERVLRGMKTQVSYLNVTRMTDYRKDGHPSIYRKQKL
TNEEKKSELLFQDCSHWCLPGVPDAWNELLYAKILVNQHMKQQEDKKT

Transcript Sequence

Gene sequence data has not been registered.